CNB and
DMNB caging groups
The effective
two photon cross sections of 4,5- dimethyloxy-2-nitrobenzyl ester
(DMNB) and (alpha-2-carboxy)-2-nitrobenzyl (CNB) caging groups were
measured (Zipfel et al, 1996). We used CNB-caged gamma-aminobutyric
acid (CNB-GABA) for measurements of the properties of the CNB caging
group, and DMNB-caged fluorescein as a representative compound for
the DMNB group. Since the photolysis process is irreversible the
method simply consists of controlled illumination and quantification
of photo product. The two compounds were photolysed using a frequency
doubled optical parametric oscillator pumped by a Ti:S laser (for
CNB), or a Ti:S laser alone (for DMNB). Small aliquots (50 ml)
of 25 mM caged compound was raster scanned avoid focal volume depletion.
Photo released GABA was quantified using HPLC analysis, and released
fluorescein by comparison with standards. The effective MPE cross-sections
of these two caging groups are shown below:
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Calcium Cages
Our technique for determining the effective two-photon cross sections
of calcium cages requires a brief pulse train of high intensity
focused laser light within a solution containing caged calcium and
a fluorescent calcium indicator dye such as Fluo-3. The high intensity
pulse train releases a fraction of the caged calcium, which is rapidly
chelated by the fluorescent indicator dye. The same laser beam that
uncages the calcium is attenuated after the photolysis pulse train
and is used to generate fluorescence from the indicator dye before
it diffuses out of the probe volume. The resultant fluorescence
decay curve is monitored and fit to a model (Shear et al, 1996)
yielding the effective uncaging cross sections of the cages and
the diffusion coefficient of the indicator dye. Using this technique
we have measured two commercially available cages, NP-EGTA and DM-Nitrophen,
and a new calcium cage, Azid-1 (S. Adams and R. Tsien, UCSD). The
effective uncaging cross sections of Azid-1 and DM-nitrophen are
shown above. The cross-section of NP-EGTA was too small to yield
detectable calcium levels at any of the wavelengths studied.
Zipfel, W.R,
Williams R.M. and W.W. Webb. Biophys J., 70(2):A196,
1996.
Shear, J.,
Brown, E., Adams, S., Tsien, R., and W. Webb. Biophys. J.
70(2):A211, 1996.
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